eVOC Related Links

eVOC Elsewhere

• OBO [http://obo.sourceforge.net/cgi-bin/detail.cgi?evoc] - eVOC's details on the Open Biological Ontologies site.
• EnsMart [http://www.ensembl.org/Multi/martview] - where you can search for genes using eVOC terms.
• LICR [http://onto.eva.mpg.de/] - online eVOC query engine and BioMoby services developed by LICR.
• BRENDA [http://www.brenda.uni-koeln.de/] - where you can search for enzymes using eVOC terms and browsing mappings from eVOC to other ontologies.
• FANTOM3 [http://fantom.gsc.riken.go.jp/] - eVOC is used to annotate the libraries
• UniProt Knowledgebase [http://www.uniprot.org/] - eVOC is used to describe the tissue vocabulary
• LifeDB [http://www.dkfz.de/LIFEdb/] - eVOC is used to describe digital northerns
• BRENDA [http://www.brenda.uni-koeln.de/] - eVOC is used to describe enzyme source information
• Alternate Transcript Diversity [http://www.ebi.ac.uk/atd/] - splicing information with eVOC annotation

Other Ontologies

• Gene Ontology (GO) [http://geneontology.org/]
• Open Biological Ontologies (OBO) [http://obo.sourceforge.net/]
• Microarray Gene Expression Data (MGED) [http://www.mged.org/]
• Cross-Species Anatomy Network (XSPAN) [http://www.xspan.org/]

Ontology Software

• DAG-Edit [http://geneontology.sourceforge.net/]
  • DAG-Edit Documentation [http://www.godatabase.org/dev/java/dagedit/docs/]
• OBO-Edit [http://sourceforge.net/project/showfiles.php?group_id=36855&package_id=148487]
  • Currently in beta testing.
• Protege [http://protege.stanford.edu/]
  • Protege OWL Plugin [http://protege.stanford.edu/plugins/owl]
• COBrA [http://www.xspan.org/applications/cobra]